CDS
| Accession Number | TCMCG007C40668 |
| gbkey | CDS |
| Protein Id | XP_009101780.1 |
| Location | complement(join(28519200..28519322,28519418..28519516,28519604..28519675,28519756..28520326,28520399..28520511,28520623..28520722,28520806..28520928,28521014..28521081,28521173..28521325,28521395..28521538,28521617..28521835,28521946..28522030,28522115..28522266,28522355..28522507,28522586..28522639,28522715..28522850,28522921..28523054,28523209..28523874)) |
| Gene | LOC103827970 |
| GeneID | 103827970 |
| Organism | Brassica rapa |
Protein
| Length | 1054aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009103532.3 |
| Definition | DNA repair protein RAD5B isoform X5 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | HIRAN |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15505
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0009507 [VIEW IN EMBL-EBI] GO:0009526 [VIEW IN EMBL-EBI] GO:0009536 [VIEW IN EMBL-EBI] GO:0009941 [VIEW IN EMBL-EBI] GO:0031967 [VIEW IN EMBL-EBI] GO:0031975 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044434 [VIEW IN EMBL-EBI] GO:0044435 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAGATGCGGAGAACCGAACACGAAGCAGCTGTTTCACGTTCAGACGATTGTAAGATCGTTGCCGATACTCCTCCCGATGAATCCTATGTGGTCCTCAGGACATCCACTGGAGTCCGAATCTCTTCTCAATTAAACGATGAATCCAAGTCGGTTCTTTCCGATGCTATGCCGGTGAAAGCCGAGGAGGTAACCGGTGACGGTTCTGTTACTCTTGGTGATGATGTAGAATCTGAATCTTTAGAGTTCCGTGTTAAGGAGGAACCTGATTTGGATTTTGAGACTCAAGAAGAAGCAATGATGATTGATGATACTGTAGAGAAGCCTATGGTGGTTGTTGAAGCTGTTTCAAGAGGCTCTGGCAACGAGTGTTTGGATGTGGAATCAGATTCTACTCATGTGAAGATGGAAGTGAGAGAAGAGAAGCCTGTGTATGTGAAGAAGGTTAATACACAGGAGGTTGATGCAAGAAAGGCGAAAGTAGAAGATGGTGATTTCCCGGTGGAGAGAGACTGGTACTTGGTTGGGAGGTCTCTTGTCACCGCGACTTCCACTAGTAAAGGAAGGAGACTCGAAGATAACGAAGTTGTGAATTTCGCATTTCCCTCTACTCTCAATTTGAAAGTTCCAAACATTGTTCGCTTCTCTACCAAAAGATGTGGAGAGATTGGTAGGCTTCCAATGGAATGGTCGAACTGGGCTGTTAGTCTTTTGAGATCTGGTAAAGTCAAAATGCTAGGCAGATGTGTAGCTGCGCCACCCTTTCTCCAAATGATGCAAGATATTATGCTATATGTCAGTTTCTACATTCACAGCTCCATATTCACTGATGTTAGCAAATCCACTTGGCGGATTGGTTCTTCACCTAACATCGAGTCCACGCTTCATCCTCTTCTTCAGCTTTTCAGACACTTGACAATCAAACCCTACCAAAAGGCTGAGTTTACTCCTCAGGAACTTGACTCTCGCAAACGCTCCCTCAACTTGGAGAATGACTCGGACGAGAGAGCAGCATTGTTGGCCATAGCGAAAAGAAGAAAAGGTGCTCCACTGTATCTTGAGCACAACAACAAAGATGAAGAAGATGCTCCTGACTCATATATGAATCGTGTCGTTGGCGCTGCAGATTCATATAACCTGGAGGAAATGGAAGCTCCAAGTAAGCTCACCTGCAACCTGAGACCATACCAGAAACAAGCACTCTACTGGATGTCAGAGTCTGAAAAAGGAATTGATGTTGATAAAGCAGCTGAAACTCTCCATCCTTGCTGGGAGGCTTATCGAATCTGTGACGAGAGGGCGCCTTCAATTTATGTGAACATCTTCAGCGGTGAAGCAACAATCCAGTTTCCAACAGCTACACAGATGGCAAGAGGCGGAATATTGGCAGATGCCATGGGACTTGGAAAAACTGTGATGACGATTGCACTGATACTTGCACGGCCAGGCCGAGGTAACCCAGAAATTGAAGATGACTTGGCGGCAGATGTTAATGGAGATAAAACTAAGAGGAATGAGAGTCATAAAGCACTAACGTGTGTGAAGGCCAAAGGAGGCACTCTTATTGTTTGCCCCATGGCATTGCTAAGCCAATGGAAGGACGAGCTTGAGACTCATTCAATGCCTGACACTGTGTCTGTGTTAAGTTACTACGGAGGGGATAGGACGCAGGACGCAAAAGCTATAGCGAGTCATGATGTGGTCTTGACAACTTATGGTGTCTTAACCTCTGCTTACAAGCAAGATATGGCGAACAGTATTTTCCACAGAATTGATTGGTACAGGATTGTTCTTGATGAAGCTCACACTATCAAATCATGGAAAACACAAGCTGCTAAAGCTACATTTGAGTTGTCTTCCCACTGCAGATGGTGTCTGACAGGGACTCCCTTACAAAACAAGCTTGAAGATCTTTACAGTCTTCTATGCTTCCTTCATGTCGAACCATGGTGCAATTGGGCTTGGTGGAATAAGTTGATTCAGAAGCCATATGAAAATGGTGATCCACGAGGACTAAAGCTAATCAAGGCGATTTTGAGGCCATTGATGCTGAGAAGAACAAAGGAGACAAGGGACAAAGAAGGAAGTCTAATTCTTGAACTTCCTCCAACCGATGTTAAAGTCATTGAATGTGAACAGTCTGAAGGAGAACGTGACTTCTATACTGCCCTTTTCAAGAGATCTAAAGTCCAGTTTGACCAGTTTGTGGCACAAGGAAGAGTTCTTCACAACTATGCAAACATCCTTGAGCTCCTCCTCCGTCTACGCCAATGTTGCAACCACCCTTTTCTAGTTATGAGCCGGGCAGATTCACAACAGTACGCTGACTTAGACAGCCTCGCAAGGAGATTTCTTGACAACAATCCTGACTCAGTTTCTCAAAGAGCTCCATCTCGGGCCTACATCGAAGAAGTTATCCAAGACATACGTGATGGCAACAGCAAAGAGTGCCCAATATGTCTGGAGTCTGCAGATGATCCCATTCTCACACCTTGTGCTCACAGAATGTGCCGTGAATGTCTCCTTACTAGCTGGCGCTCTACTTCTTGTGGTCTATGCCCAATCTGCAGGACTGTACTGAAGAAAACTGAGCTCATCTCATGCCCAACGGAGAGTATATTCCGCGTTGATGTTGTAAAGAACTGGAAGGAGTCTTCAAAGGTCTCAGAGCTTATAAAATGCTTAGAGAAGATTCGGATGTCTGGTACGGGAGAGAAGAGCATTGTGTTTAGCCAGTGGACTTCGTTTTTGGATCTCCTGGAGATTCCTTTGAGAAGAAGAGGAATTGAGTTTCTTAGATTCGATGGGAAGCTTGCACAGAAGGCGAGAGAAAAGGTCTTAAAGGAGTTCAATGAAACCAAACAGAAAACAGTTCTGCTTATGTCTCTGAAAGCTGGAGGAGTTGGTCTGAATCTGACCGCAGCTTCAAACGTTTTCTTAATGGATCCATGGTGGAATCCGGCGGTGGAAGAGCAAGCAATCATGAGAATTCATCGCATAGGGCAGAAAAGAACTGTATGCGTCAGAAGATTCATTGTCAAGGATACAGTAGAGGAACGGATGCAGCAAGTTCAGGCGAGGAAGCAGCGGATGATTGCTGGAGCTTTGACTGACGAAGAAGTCCGGTCGGCCAGACTTGAGGAGCTTAAAATGTTGTTCCGATGA |
| Protein: MEMRRTEHEAAVSRSDDCKIVADTPPDESYVVLRTSTGVRISSQLNDESKSVLSDAMPVKAEEVTGDGSVTLGDDVESESLEFRVKEEPDLDFETQEEAMMIDDTVEKPMVVVEAVSRGSGNECLDVESDSTHVKMEVREEKPVYVKKVNTQEVDARKAKVEDGDFPVERDWYLVGRSLVTATSTSKGRRLEDNEVVNFAFPSTLNLKVPNIVRFSTKRCGEIGRLPMEWSNWAVSLLRSGKVKMLGRCVAAPPFLQMMQDIMLYVSFYIHSSIFTDVSKSTWRIGSSPNIESTLHPLLQLFRHLTIKPYQKAEFTPQELDSRKRSLNLENDSDERAALLAIAKRRKGAPLYLEHNNKDEEDAPDSYMNRVVGAADSYNLEEMEAPSKLTCNLRPYQKQALYWMSESEKGIDVDKAAETLHPCWEAYRICDERAPSIYVNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPEIEDDLAADVNGDKTKRNESHKALTCVKAKGGTLIVCPMALLSQWKDELETHSMPDTVSVLSYYGGDRTQDAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWNKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVKVIECEQSEGERDFYTALFKRSKVQFDQFVAQGRVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQRAPSRAYIEEVIQDIRDGNSKECPICLESADDPILTPCAHRMCRECLLTSWRSTSCGLCPICRTVLKKTELISCPTESIFRVDVVKNWKESSKVSELIKCLEKIRMSGTGEKSIVFSQWTSFLDLLEIPLRRRGIEFLRFDGKLAQKAREKVLKEFNETKQKTVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR |